BRIDGE
BRIDGE is an interactive app for multi-omics data exploration, analysis, and integration. It is designed to let users work through a full workflow in a GUI, from loading curated datasets to generating plots and integrated views across omics layers.
Supported data types:
- Proteomics
- Phosphoproteomics
- RNA-seq
What this guide covers:
- Installing and running BRIDGE
- Creating and validating the SQLite database
- Loading datasets correctly
- Getting to a first successful plot
- Using each analysis module
- Running raw and processed integration
Recommended reading order for a first pass:
- Quick Start
- Introduction
- Methodology
- Installation
- Data Requirements
- Database Generation
- Loading Data
- Individual Exploration
If you only want to try the app quickly, start with Quick Start. If you want to understand exactly what BRIDGE computes before interpreting results, read Methodology.